Application of LAMP technology (Loop-mediated isothermal amplification) for molecular diagnosis of Schistosoma haematobium infections
Abstract Schistosoma haematobium (the causative agent of genitorurinary schistosomiasis) affects 112 million people in 54 countries in Africa and the East. The gold standard diagnosis is microscopic observation of parasite eggs in urine of patients, although with limitations. Serological and molecular diagnosis also have limitations and are difficult to perform in endemic areas. An alternative is isothermal LAMP-type nucleic acid amplification. In previous studies we developed a molecular method based on LAMP technology to detect S. haematobium DNA (Sh-LAMP) with high specificity and sensitivity. Here, we evaluated its performance on urine samples collected in a urogenital schistosomiasis endemic area (Cubal, Angola). We selected 33 urine samples with field microscopic analysis: 14 negative and 19 positive. DNA was extracted and analysed by colorimetric Sh-LAMP. We obtained a positive Sh-LAMP result (89.5%) in 17/19 microscopically positive samples and negative in the 14 microscopically negative samples. The ease of use and interpretation and the level of reproducibility of the results with respect to microscopy suggest that Sh-LAMP can be an effective tool for molecular diagnosis of urogenital schistosomiasis and useful in epidemiological mapping and disease control studies.
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Chala B. Advances in Diagnosis of Schistosomiasis: Focus on Challenges and Future Approaches. Int J Gen Med. 2023;16: 983-995.
Colley DG, Bustinduy AL, Secor WE, King CH. Human schistosomiasis. Lancet. 2014; 383(9936): 2253-64.
Fernández-Soto P, Velasco Tirado V, Carranza Rodríguez C, Pérez-Arellano JL, Muro A. Long-term frozen storage of urine samples: a trouble to get PCR results in Schistosoma spp. DNA detection? PLoS ONE 2013; 8(4): e61703.
Gandasegui J, Fernández-Soto P, Carranza-Rodríguez C, Pérez-Arellano JL, Vicente B, López-Abán J et al. The Rapid-Heat LAMPellet Method: A Potential Diagnostic Method for Human Urogenital Schistosomiasis. PLoS Negl Trop Dis. 2015; 9(7): e0003963.
Gandasegui J, Fernández-Soto P, Dacal E, Rodríguez E, Saugar JM, Yepes E et al. Field and laboratory comparative evaluation of a LAMP assay for the diagnosis of urogenital schistosomiasis in Cubal, Central Angola. Trop Med Int Health. 2018;23(9):992-1001.
Hinz R, Schwarz NG, Hahn A, Frickmann H. Serological approaches for the diagnosis of schistosomiasis - A review. Mol Cell Probes. 2017; 31:2-21.
McManus DP, Dunne DW, Sacko M, Utzinger J, Vennervald BJ, Zhou XN. Schistosomiasis. Nat Rev Dis Primers 2018; 4(1): 13.
Notomi T, Okayama H, Masubuchi H, Yonekawa T., Watanabe K, Amino N et al. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res. 2000; 28 (12): e63.
Salas-Coronas J, Luzón-García MP, Crego-Vicente B, Soriano-Pérez MJ, Febrer-Sendra B, Vázquez-Villegas J et al. Evaluation of Loop-Mediated Isothermal Amplification (LAMP) in Urine Samples for the Diagnosis of Imported Schistosomiasis. Trop Med Infect Dis. 2023;8(12):518.
Sánchez-Marqués R, Bocanegra C, Salvador F, Nindia A, Pintar Z, Martínez-Campreciós J et al. Prevalence and morbidity of urogenital schistosomiasis among pre-school age children in Cubal, Angola. PLoS Negl Trop Dis. 2023; 17(11): e0011751.
Sánchez-Marqués R, Salvador F, Bocanegra C, Nindia A, Pintar Z, Martínez J et al. Schistosoma haematobium infection and morbidity risk factors for pre-school age children in western Angola: A knowledge, attitudes and practices survey. PLoS Negl Trop Dis. 2023; 17(10): e0011650.
Tomita N, Mori Y, Kanda H, Notomi T. Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products. Nat Protoc. 2008; 3(5): 877-882.
WHO. Fact Sheet Schistosomiasis [Internet]. WHO [actualizado 01 Feb 2023; citado 22 Ene 2024]. Disponible en: https://www.who.int/en/newsroom/fact-sheets/detail/schistosomiasis.
Zhang X, Zhao Y, Zeng Y, Zhang C. Evolution of the Probe-Based Loop-Mediated Isothermal Amplification (LAMP) Assays in Pathogen Detection. Diagnostics. 2023; 13 (9): 1530.
Chala B. Advances in Diagnosis of Schistosomiasis: Focus on Challenges and Future Approaches. Int J Gen Med. 2023;16: 983-995.
Colley DG, Bustinduy AL, Secor WE, King CH. Human schistosomiasis. Lancet. 2014; 383(9936): 2253-64.
Fernández-Soto P, Velasco Tirado V, Carranza Rodríguez C, Pérez-Arellano JL, Muro A. Long-term frozen storage of urine samples: a trouble to get PCR results in Schistosoma spp. DNA detection? PLoS ONE 2013; 8(4): e61703.
Gandasegui J, Fernández-Soto P, Carranza-Rodríguez C, Pérez-Arellano JL, Vicente B, López-Abán J et al. The Rapid-Heat LAMPellet Method: A Potential Diagnostic Method for Human Urogenital Schistosomiasis. PLoS Negl Trop Dis. 2015; 9(7): e0003963.
Gandasegui J, Fernández-Soto P, Dacal E, Rodríguez E, Saugar JM, Yepes E et al. Field and laboratory comparative evaluation of a LAMP assay for the diagnosis of urogenital schistosomiasis in Cubal, Central Angola. Trop Med Int Health. 2018;23(9):992-1001.
Hinz R, Schwarz NG, Hahn A, Frickmann H. Serological approaches for the diagnosis of schistosomiasis - A review. Mol Cell Probes. 2017; 31:2-21.
McManus DP, Dunne DW, Sacko M, Utzinger J, Vennervald BJ, Zhou XN. Schistosomiasis. Nat Rev Dis Primers 2018; 4(1): 13.
Notomi T, Okayama H, Masubuchi H, Yonekawa T., Watanabe K, Amino N et al. Loop-mediated isothermal amplification of DNA. Nucleic Acids Res. 2000; 28 (12): e63.
Salas-Coronas J, Luzón-García MP, Crego-Vicente B, Soriano-Pérez MJ, Febrer-Sendra B, Vázquez-Villegas J et al. Evaluation of Loop-Mediated Isothermal Amplification (LAMP) in Urine Samples for the Diagnosis of Imported Schistosomiasis. Trop Med Infect Dis. 2023;8(12):518.
Sánchez-Marqués R, Bocanegra C, Salvador F, Nindia A, Pintar Z, Martínez-Campreciós J et al. Prevalence and morbidity of urogenital schistosomiasis among pre-school age children in Cubal, Angola. PLoS Negl Trop Dis. 2023; 17(11): e0011751.
Sánchez-Marqués R, Salvador F, Bocanegra C, Nindia A, Pintar Z, Martínez J et al. Schistosoma haematobium infection and morbidity risk factors for pre-school age children in western Angola: A knowledge, attitudes and practices survey. PLoS Negl Trop Dis. 2023; 17(10): e0011650.
Tomita N, Mori Y, Kanda H, Notomi T. Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products. Nat Protoc. 2008; 3(5): 877-882.
WHO. Fact Sheet Schistosomiasis [Internet]. WHO [actualizado 01 Feb 2023; citado 22 Ene 2024]. Disponible en: https://www.who.int/en/newsroom/fact-sheets/detail/schistosomiasis.
Zhang X, Zhao Y, Zeng Y, Zhang C. Evolution of the Probe-Based Loop-Mediated Isothermal Amplification (LAMP) Assays in Pathogen Detection. Diagnostics. 2023; 13 (9): 1530.
Mateos Carril, D., Crego-Vicente, B., Diego del Olmo, M., & Fernández-Soto, P. (2024). Application of LAMP technology (Loop-mediated isothermal amplification) for molecular diagnosis of Schistosoma haematobium infections. FarmaJournal, 9(2), 51–61. https://doi.org/10.14201/fj2024925161
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