Sea Turtle Trajectories Prediction via Long Short-Term Memory and Kalman-Filter

  • Carlos A. Rovetto R.
    Facultad de Ingeniería en Sistemas Computacionales, Universidad Tecnológica de Panamá, Panamá carlos.rovetto[at]utp.ac.pa
  • Eric E. Flores
    Coiba Scientific Station (COIBA AIP), Panamá, Panamá
  • Kexy Rodriguez
  • Ivonne Nuñez
    CDS Research Group, Institute of Computer Science, University of Bern, 3012 Bern, Switzerland
  • Andrzej Smolarz
    Lublin University of Technology, Department of Computer and Electrical Engineering, Poland
  • Dimas Concepción
    Escuela de Innovación Digital, Instituto Técnico Superior Especializado, Panamá, Panamá
  • Elia E. Cano

Abstract

Tracking sea turtle migration is hindered by noisy and incomplete geolocation data, as well as irregular sensor transmission. These limitations make it challenging to model trajectories and accurately interpret ecological patterns. This study presents a predictive framework for modelling the trajectories of green turtles (Chelonia mydas) using satellite telemetry and artificial intelligence techniques. Georeferenced data from SPOT-375B tags were pre-processed to address noise, data gaps, and spatial anomalies. A Long Short-Term Memory (LSTM) neural network was trained with normalized time series data to forecast future positions, capturing the temporal dependencies of turtle movement. A Kalman filter was applied post-prediction to enhance trajectory continuity and reduce uncertainty through recursive state estimation. Experimental results show that the approach yields an average MAE of 0.0986, MSE of 0.0307, and RMSE of 0.1288, and reduces mean prediction error by 43.75 % relative to a recurrent neural network (RNN) baseline while requiring ~36 % of its CPU time. This integrated pipeline enhances the reliability of wildlife trajectory forecasting and provides a scalable solution for ecological tracking under uncertain detection conditions, facilitating a deeper understanding of species behavior and more effective conservation strategies.

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Abang Shakawi, A. M. H., Shabri, A., & Hassan, R. (2024, October 1). Forecasting Green Sea Turtle (Chelonia mydas) Landing in Sarawak Using Grey Model. | EBSCOhost. https://doi.org/10.55230/mabjournal.v53i4.3050

Alia, A., Maree, M., & Chraibi, M. (2022). On the exploitation of GPS-based data for real-time visualisation of pedestrian dynamics in open environments. Behaviour & Information Technology, 41(8), 1709–1723. https://doi.org/10.1080/0144929X.2021.1896781

Alsaidi, M., Al-Jassani, M. G., Bang, C., O’Corry-Crowe, G., Watt, C., Ghazal, M., & Zhuang, H. (2024). Localization and tracking of beluga whales in aerial video using deep learning. Frontiers in Marine Science, 11. https://doi.org/10.3389/fmars.2024.1445698

Anselin, L., & Rey, S. J. (2022). Open Source Software for Spatial Data Science. Geographical Analysis, 54(3), 429–438. https://doi.org/10.1111/gean.12339

Azizan, N. H., Naharudin, N., Hashim, N., & Rusli, M. U. (2023). Site Suitability Analysis for Sea Turtle Nesting Area by using AHP and GIS. IOP Conference Series: Earth and Environmental Science, 1217(1), 012031. https://doi.org/10.1088/1755-1315/1217/1/012031

Benscoter, A. M., Smith, B. J., & Hart, K. M. (2022). Loggerhead marine turtles (Caretta caretta) nesting at smaller sizes than expected in the Gulf of Mexico: Implications for turtle behavior, population dynamics, and conservation. Conservation Science and Practice, 4(1), e581. https://doi.org/10.1111/csp2.581

Bokani, A., Yadegaridehkordi, E., & Kanhere, S. S. (2025). LSTM-H: A Hybrid Deep Learning Model for Accurate Livestock Movement Prediction in UAV-Based Monitoring Systems. Drones, 9(5), 346. https://doi.org/10.3390/drones9050346

Cai, L., Aikio, A., Kullen, A., Deng, Y., Zhang, Y., Zhang, S.-R., Virtanen, I., & Vanhamäki, H. (2022). GeospaceLAB: Python package for managing and visualizing data in space physics. Frontiers in Astronomy and Space Sciences, 9. https://doi.org/10.3389/fspas.2022.1023163

Chambault, P., Fossette, S., Heide-Jørgensen, M. P., Jouannet, D., & Vély, M. (2021). Predicting seasonal movements and distribution of the sperm whale usin g machine learning algorithms. Ecology and Evolution, 11(3), 1432–1445. https://doi.org/10.1002/ece3.7154

Chambault, P., Gaspar, P., & Dell’Amico, F. (2021). Ecological Trap or Favorable Habitat? First Evidence That Immature Sea Turtles May Survive at Their Range-Limits in the North-East Atlantic. Frontiers in Marine Science, 8. https://doi.org/10.3389/fmars.2021.736604

Christiaanse, J. C., Antolínez, J. A. A., Luijendijk, A. P., Athanasiou, P., Duarte, C. M., & Aarninkhof, S. (2024). Distribution of global sea turtle nesting explained from regional-scal e coastal characteristics. Scientific Reports, 14(1), 752. https://doi.org/10.1038/s41598-023-50239-5

Cullen, J. A., Domit, C., Lamont, M. M., Marshall, C. D., Santos, A. J. B., Sasso, C. R., Al Ansi, M., Hart, K. M., & Fuentes, M. M. P. B. (2024). A comparative framework to develop transferable species distribution m odels for animal telemetry data. Ecosphere, 15(12), e70136. https://doi.org/10.1002/ecs2.70136

DiMatteo, A., Lockhart, G., & Barco, S. (2021). Normalizing home ranges of immature Kemp’s ridley turtles (Lepidochely s kempii) in an important estuarine foraging area to better assess the ir spatial distribution. Marine Biology Research, 17(1), 57–71. https://doi.org/10.1080/17451000.2021.1896004

Goodwin, M., Halvorsen, K., Jiao, L., Knausgård, K., Martin, A., Moyano, M., Oomen, R., Rasmussen, J. H., Sørdalen, T., & Thorbjørnsen, S. (2022). Unlocking the potential of deep learning for marine ecology: Overview, applications, and outlook. ICES Journal of Marine Science, 79. https://doi.org/10.1093/icesjms/fsab255

Gupte, P. R., Beardsworth, C. E., Spiegel, O., Lourie, E., Toledo, S., Nathan, R., & Bijleveld, A. I. (2022). A guide to pre-processing high-throughput animal tracking data. Journal of Animal Ecology, 91(2), 287–307. https://doi.org/10.1111/1365-2656.13610

Hardin, E. E., Cullen, J. A., & Fuentes, M. M. P. B. (2024). Comparing acoustic and satellite telemetry: An analysis quantifying th e space use of Chelonia mydas in Bimini, Bahamas. Royal Society Open Science, 11(1), 231152. https://doi.org/10.1098/rsos.231152

Hays, G. C., Laloë, J.-O., Rattray, A., & Esteban, N. (2021). Why do Argos satellite tags stop relaying data? Ecology and Evolution, 11(11), 7093–7101. https://doi.org/10.1002/ece3.7558

Jeantet, L., Planas-Bielsa, V., Benhamou, S., Geiger, S., Martin, J., Siegwalt, F., Lelong, P., Gresser, J., Etienne, D., Hiélard, G., Arque, A., Regis, S., Lecerf, N., Frouin, C., Benhalilou, A., Murgale, C., Maillet, T., Andreani, L., Campistron, G., … Chevallier, D. (2020). Behavioural inference from signal processing using animal-borne multi- sensor loggers: A novel solution to extend the knowledge of sea turtle ecology. Royal Society Open Science, 7(5), 200139. https://doi.org/10.1098/rsos.200139

Kipnis, D., Levy, Y., & Diamant, R. (2023). Sonar Point Cloud Processing to Identify Sea Turtles by Pattern Analys is. IEEE Journal of Oceanic Engineering, 48(2), 431–442. https://doi.org/10.1109/JOE.2022.3214274

Kot, C. Y., Åkesson, S., Alfaro-Shigueto, J., Amorocho Llanos, D. F., Antonopoulou, M., Balazs, G. H., Baverstock, W. R., Blumenthal, J. M., Broderick, A. C., Bruno, I., Canbolat, A. F., Casale, P., Cejudo, D., Coyne, M. S., Curtice, C., DeLand, S., DiMatteo, A., Dodge, K., Dunn, D. C., … Halpin, P. N. (2022). Network analysis of sea turtle movements and connectivity: A tool for conservation prioritization. Diversity and Distributions, 28(4), 810–829. https://doi.org/10.1111/ddi.13485

Labrada-Martagón, V., Islas Madrid, N. L., Yáñez-Estrada, L., Muñoz-Tenería, F. A., Solé, M., & Zenteno-Savín, T. (2024). Evidence of oxidative stress responses of green turtles (Chelonia mydas) to differential habitat conditions in the Mexican Caribbean. Science of The Total Environment, 946, 174151. https://doi.org/10.1016/j.scitotenv.2024.174151

Li, J., Xu, W., Deng, L., Xiao, Y., Han, Z., & Zheng, H. (2023). Deep learning for visual recognition and detection of aquatic animals: A review. Reviews in Aquaculture, 15(2), 409–433. https://doi.org/10.1111/raq.12726

Li, X., Sindihebura, T. T., Zhou, L., Duarte, C. M., Costa, D. P., Hindell, M. A., McMahon, C., Muelbert, M. M. C., Zhang, X., & Peng, C. (2021). A prediction and imputation method for marine animal movement data. PeerJ Computer Science, 7, e656. https://doi.org/10.7717/peerj-cs.656

Mestre, J., Patrício, A. R., Sidina, E., Senhoury, C., El’bar, N., Beal, M., Regalla, A., & Catry, P. (2024). Movement patterns of green turtles at a key foraging site: The Banc d’ Arguin, Mauritania. Marine Biology, 172(1), 1. https://doi.org/10.1007/s00227-024-04558-4

Miao, Y., Li, B., & Guo, X. (2024). Research on multi-submersible positioning prediction based on Kalman filter and LSTM neural network. Journal of Physics: Conference Series, 2898(1), 012026. https://doi.org/10.1088/1742-6596/2898/1/012026

Nathan, R., Monk, C. T., Arlinghaus, R., Adam, T., Alós, J., Assaf, M., Baktoft, H., Beardsworth, C. E., Bertram, M. G., Bijleveld, A. I., Brodin, T., Brooks, J. L., Campos-Candela, A., Cooke, S. J., Gjelland, K. Ø., Gupte, P. R., Harel, R., Hellström, G., Jeltsch, F., … Jarić, I. (2022). Big-data approaches lead to an increased understanding of the ecology of animal movement. Science, 375(6582), eabg1780. https://doi.org/10.1126/science.abg1780

Ning, H., Li, Z., Akinboyewa, T., & Lessani, M. N. (2025). An autonomous GIS agent framework for geospatial data retrieval. International Journal of Digital Earth, 18(1), 2458688. https://doi.org/10.1080/17538947.2025.2458688

Noguchi, N., Nishizawa, H., Shimizu, T., Okuyama, J., Kobayashi, S., Tokuda, K., Tanaka, H., & Kondo, S. (2025). Efficient wildlife monitoring: Deep learning-based detection and count ing of green turtles in coastal areas. Ecological Informatics, 86, 103009. https://doi.org/10.1016/j.ecoinf.2025.103009

Pasanisi, E., Pace, D. S., Orasi, A., Vitale, M., & Arcangeli, A. (2024). A global systematic review of species distribution modelling approache s for cetaceans and sea turtles. Ecological Informatics, 82, 102700. https://doi.org/10.1016/j.ecoinf.2024.102700

Perneel, M., Adriaens, I., Aernouts, B., & Verwaeren, J. (2025). Consistent multi-animal pose estimation in cattle using dynamic Kalman filter based tracking. Smart Agricultural Technology, 11, 101014. https://doi.org/10.1016/j.atech.2025.101014

Restrepo, J., Webster, E. G., Ramos, I., & Valverde, R. A. (2023). Recent decline of green turtle Chelonia mydas nesting trend at Tortugu ero, Costa Rica. Endangered Species Research, 51, 59–72. https://doi.org/10.3354/esr01237

Rider, M. J., Avens, L., Haas, H. L., Hatch, J. M., Patel, S. H., & Sasso, C. R. (2024). Where the leatherbacks roam: Movement behavior analyses reveal novel foraging locations along the Northwest Atlantic shelf. Frontiers in Marine Science, 11. https://doi.org/10.3389/fmars.2024.1325139

Rodríguez-Martínez, K., Rovetto, C., Cano, E., & Flores, E. E. (2024). Optimization of satellite biotelemetry data in seaturtles through outlier removal techniques. 2024 9th International Engineering, Sciences and Technology Conference (IESTEC), 188–193. https://doi.org/10.1109/IESTEC62784.2024.10820233

Rovetto, C., Cruz, E., Flores, E., Nuñez, I., Rodriguez, K., & Cano, E. (2023). Behavioral data analysis of sea turtles from the Pacific coast of Panama, using biotelemetry. 2023 VI Congreso Internacional En Inteligencia Ambiental, Ingeniería de Software y Salud Electrónica y Móvil (AmITIC), 1–7. https://doi.org/10.1109/AmITIC60194.2023.10366354

Santos, A. J. B., Cullen, J., Vieira, D. H. G., Lima, E. H. S. M., Quennessen, V., Santos, E. A. P. dos, Bellini, C., Ramos, R., & Fuentes, M. M. P. B. (2023). Decoding the internesting movements of marine turtles using a fine-scale behavioral state approach. Frontiers in Ecology and Evolution, 11. https://doi.org/10.3389/fevo.2023.1229144

Shakawi, A. M. H. A., Shabri, A., & Hassan, R. (2024). Forecasting Green Sea Turtle (Chelonia mydas) Landing in Sarawak Using Grey Model. Malaysian Applied Biology, 53(4), 115–124. https://doi.org/10.55230/mabjournal.v53i4.3050

Sharmila, S., & Sabarish, B. A. (2021). Analysis of distance measures in spatial trajectory data clustering. IOP Conference Series: Materials Science and Engineering, 1085(1), 012021. https://doi.org/10.1088/1757-899X/1085/1/012021

Steenacker, M., Tanabe, L. K., Rusli, M. U., & Fournier, D. (2023). The influence of incubation duration and clutch relocation on hatchlin g morphology and locomotor performances of green turtle (Chelonia m ydas). Journal of Experimental Marine Biology and Ecology, 569, 151954. https://doi.org/10.1016/j.jembe.2023.151954

Tariq, U., Ahmed, I., Khan, M. A., & Bashir, A. K. (2025). Bridging biosciences and deep learning for revolutionary discoveries: A comprehensive review. IAES International Journal of Artificial Intelligence (IJ-AI), 14(2), 867–883. https://doi.org/10.11591/ijai.v14.i2.pp867-883

Wang, M., Xu, C., Zhou, C., Gong, Y., & Qiu, B. (2022). Study on Underwater Target Tracking Technology Based on an LSTM–Kalman Filtering Method. Applied Sciences, 12(10), 5233. https://doi.org/10.3390/app12105233

Wijeyakulasuriya, D. A., Eisenhauer, E. W., Shaby, B. A., & Hanks, E. M. (2020). Machine learning for modeling animal movement. PLOS ONE, 15(7), e0235750. https://doi.org/10.1371/journal.pone.0235750

Zakry, K. A., Soria, M. S., Hipiny, I., Ujir, H., Hassan, R., & Hardi, R. (2024). Chelonia mydas detection and image extraction from field recordings. IAES International Journal of Artificial Intelligence (IJ-AI), 13(2), 2354–2363. https://doi.org/10.11591/ijai.v13.i2.pp2354-2363
Rovetto R., C. A., Flores, E. E., Rodriguez, K., Nuñez, I., Smolarz, A., Concepción, D., & Cano, E. E. (2025). Sea Turtle Trajectories Prediction via Long Short-Term Memory and Kalman-Filter. ADCAIJ: Advances in Distributed Computing and Artificial Intelligence Journal, 14, e33385. https://doi.org/10.14201/adcaij.33385

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